CAFRI-Rice CRISPR Applicable Functional Redundancy Inspector
About CAFRI-Rice
Functional redundancy among important rice genes gives genetic stability but it has been a bottle-neck in rice functional study for a long time. Thanks to the advance of next generation sequencing technology, genome editing with CRISPR/Cas9 system, and our previous empirical insight on the genome diversity, we tried to address our goal for rice functional genomics with bioinformatics approach. Here, we developed an intuitive functional redundancy inspector, CAFRI-Rice to facilitate rice functional study. By constructing phylogenetic heatmap with reannotated protein domains of MSU7 genome and anatomical RNA-Seq data, It can visualize and digitize functional redundancy of each quried gene.
Basic Logic
Notice
CAFRI-Rice Launched !!
2019. December.
Documentation
CAFRI‐Rice: CRISPR Applicable Functional Redundancy Inspector to Accelerate Functional Genomics in Rice. doi:10.1111/tpj.14926
CAFRI-Rice will be unstable due to university blackout!
12th of July (GMT+9)
CAFRI for Arabidopsis is now available!